From 962fc352ae0841723565e50180e153dee345df3f Mon Sep 17 00:00:00 2001 From: Mauricio Carneiro Date: Thu, 29 Mar 2012 18:01:43 -0400 Subject: [PATCH] unnecessary substitution. --- .../gatk/walkers/varianteval/VariantEvalIntegrationTest.java | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/public/java/test/org/broadinstitute/sting/gatk/walkers/varianteval/VariantEvalIntegrationTest.java b/public/java/test/org/broadinstitute/sting/gatk/walkers/varianteval/VariantEvalIntegrationTest.java index 128f11a31..610733d9c 100755 --- a/public/java/test/org/broadinstitute/sting/gatk/walkers/varianteval/VariantEvalIntegrationTest.java +++ b/public/java/test/org/broadinstitute/sting/gatk/walkers/varianteval/VariantEvalIntegrationTest.java @@ -439,7 +439,7 @@ public class VariantEvalIntegrationTest extends WalkerTest { buildCommandLine( "-T VariantEval", "-R " + b37KGReference, - "--dbsnp " + "/humgen/gsa-hpprojects/GATK/data/Comparisons/Validated/dbSNP/dbsnp_132_b37.leftAligned.vcf", + "--dbsnp " + b37dbSNP132, "--eval " + fundamentalTestSNPsVCF, "-noEV", "-EV CountVariants",