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Docs for --keepOriginalAC were wrong in SelectVariants

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Eric Banks 2012-08-22 13:07:13 -04:00
parent 2409aa9bfd
commit 944e1c299d
1 changed files with 1 additions and 1 deletions
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public/java/src/org/broadinstitute/sting/gatk/walkers/variantutils/SelectVariants.java
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@ -265,7 +265,7 @@ public class SelectVariants extends RodWalker<Integer, Integer> implements TreeR
@Argument(fullName="restrictAllelesTo", shortName="restrictAllelesTo", doc="Select only variants of a particular allelicity. Valid options are ALL (default), MULTIALLELIC or BIALLELIC", required=false) @Argument(fullName="restrictAllelesTo", shortName="restrictAllelesTo", doc="Select only variants of a particular allelicity. Valid options are ALL (default), MULTIALLELIC or BIALLELIC", required=false)
private NumberAlleleRestriction alleleRestriction = NumberAlleleRestriction.ALL; private NumberAlleleRestriction alleleRestriction = NumberAlleleRestriction.ALL;
@Argument(fullName="keepOriginalAC", shortName="keepOriginalAC", doc="Don't update the AC, AF, or AN values in the INFO field after selecting", required=false) @Argument(fullName="keepOriginalAC", shortName="keepOriginalAC", doc="Store the original AC, AF, and AN values in the INFO field after selecting (using keys AC_Orig, AF_Orig, and AN_Orig)", required=false)
private boolean KEEP_ORIGINAL_CHR_COUNTS = false; private boolean KEEP_ORIGINAL_CHR_COUNTS = false;
/** /**