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Merge pull request #815 from broadinstitute/ldg_updateMulitallelicVAtestData 

Update test data so it better reflects the multiallelic AC/AF annotation...
This commit is contained in:
ldgauthier 2015-03-01 12:10:25 -05:00
parent 21390575dd 4a493a7900
commit 8efaa97d84
1 changed files with 1 additions and 1 deletions
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2
protected/gatk-tools-protected/src/test/java/org/broadinstitute/gatk/tools/walkers/annotator/VariantAnnotatorIntegrationTest.java
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@ -246,7 +246,7 @@ public class VariantAnnotatorIntegrationTest extends WalkerTest {
public void testUsingExpressionMultiAllele() {
WalkerTestSpec spec = new WalkerTestSpec(
baseTestString() + " --resource:foo " + privateTestDir + "targetAnnotations-multiAllele.vcf -G Standard --variant " + privateTestDir + "vcfexample3empty-multiAllele.vcf -E foo.AF -E foo.AC -L " + privateTestDir + "vcfexample3empty-multiAllele.vcf", 1,
Arrays.asList("24d56a0fdb4b99b8b2ff193b6ebdc77c"));
Arrays.asList("195cf0f5b1aa5c7d00a0595dcca02f4c"));
executeTest("using expression with multi-alleles", spec);
}