diff --git a/java/src/org/broadinstitute/sting/gatk/walkers/variantutils/VariantsToTable.java b/java/src/org/broadinstitute/sting/gatk/walkers/variantutils/VariantsToTable.java index f39ca00d2..e75766e12 100755 --- a/java/src/org/broadinstitute/sting/gatk/walkers/variantutils/VariantsToTable.java +++ b/java/src/org/broadinstitute/sting/gatk/walkers/variantutils/VariantsToTable.java @@ -117,7 +117,7 @@ public class VariantsToTable extends RodWalker { if ( ++nRecords < MAX_RECORDS || MAX_RECORDS == -1 ) { Collection vcs = tracker.getAllVariantContexts(ref, context.getLocation()); for ( VariantContext vc : vcs) { - if ( ! ignoreMultiAllelic || vc.isBiallelic() || ( showFiltered || ! vc.isNotFiltered() ) ) { + if ( ! ignoreMultiAllelic || vc.isBiallelic() || ( showFiltered || vc.isNotFiltered() ) ) { List vals = extractFields(vc, fieldsToTake); out.println(Utils.join("\t", vals));