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Fixed an integration test which crashed on the out of date LSF DRMAA library when run against the obsolete LSF dotkit instead of .combined_LSF_SGE

This commit is contained in:
Khalid Shakir 2011-09-23 21:03:22 -04:00
parent fbe3c1e0b3
commit 8ceb93b8ac
1 changed files with 15 additions and 1 deletions
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16
public/java/test/org/broadinstitute/sting/jna/drmaa/v1_0/JnaSessionIntegrationTest.java
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@ -34,6 +34,7 @@ import java.io.File;
import java.util.*; import java.util.*;
public class JnaSessionIntegrationTest extends BaseTest { public class JnaSessionIntegrationTest extends BaseTest {
private String implementation = null;
private static final SessionFactory factory = new JnaSessionFactory(); private static final SessionFactory factory = new JnaSessionFactory();
@Test @Test
@ -44,10 +45,23 @@ public class JnaSessionIntegrationTest extends BaseTest {
System.out.println(String.format("DRMAA contact(s): %s", session.getContact())); System.out.println(String.format("DRMAA contact(s): %s", session.getContact()));
System.out.println(String.format("DRM system(s): %s", session.getDrmSystem())); System.out.println(String.format("DRM system(s): %s", session.getDrmSystem()));
System.out.println(String.format("DRMAA implementation(s): %s", session.getDrmaaImplementation())); System.out.println(String.format("DRMAA implementation(s): %s", session.getDrmaaImplementation()));
this.implementation = session.getDrmaaImplementation();
} }
@Test @Test(dependsOnMethods = { "testDrmaa" })
public void testSubmitEcho() throws Exception { public void testSubmitEcho() throws Exception {
if (implementation.contains("LSF")) {
System.err.println(" ***********************************************************");
System.err.println(" *************************************************************");
System.err.println(" **** ****");
System.err.println(" **** Skipping JnaSessionIntegrationTest.testSubmitEcho() ****");
System.err.println(" **** Are you using the dotkit .combined_LSF_SGE? ****");
System.err.println(" **** ****");
System.err.println(" *************************************************************");
System.err.println(" ***********************************************************");
return;
}
File outFile = createNetworkTempFile("JnaSessionIntegrationTest-", ".out"); File outFile = createNetworkTempFile("JnaSessionIntegrationTest-", ".out");
Session session = factory.getSession(); Session session = factory.getSession();
session.init(null); session.init(null);