From 8ad181f46f72c06c82a8cb543eaf7aec38a26623 Mon Sep 17 00:00:00 2001 From: asivache Date: Mon, 21 Sep 2009 17:40:52 +0000 Subject: [PATCH] Note to myself: do 'ant clean' now and then or old versions of the code that suddenly became invalid will stick around. The world is not perfect, and neither is automatic dependency resolution. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1672 348d0f76-0448-11de-a6fe-93d51630548a --- .../sting/gatk/datasources/providers/RodLocusView.java | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/java/src/org/broadinstitute/sting/gatk/datasources/providers/RodLocusView.java b/java/src/org/broadinstitute/sting/gatk/datasources/providers/RodLocusView.java index 14ead32fb..589a72eec 100644 --- a/java/src/org/broadinstitute/sting/gatk/datasources/providers/RodLocusView.java +++ b/java/src/org/broadinstitute/sting/gatk/datasources/providers/RodLocusView.java @@ -134,7 +134,7 @@ public class RodLocusView extends LocusView implements ReferenceOrderedView { } private Collection> getSpanningTracks(ReferenceOrderedDatum marker) { - RODRecordList wrapper = new RODRecordList(marker.getName(),Collections.singletonList(marker)); + RODRecordList wrapper = new RODRecordList(marker.getName(),Collections.singletonList(marker),marker.getLocation()); return rodQueue.allElementsLTE(wrapper); }