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Proper exception chaining for troubleshooting Sendu's issue. 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3556 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
hanna 2010-06-15 01:38:36 +00:00
parent 8defb30796
commit 8a895f481f
1 changed files with 2 additions and 2 deletions
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4
java/src/org/broadinstitute/sting/gatk/datasources/simpleDataSources/ReferenceOrderedDataSource.java
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@ -214,7 +214,7 @@ class ReferenceOrderedQueryDataPool extends ResourcePool<FeatureReader, Location
return new SeekableRODIterator(new FeatureToGATKFeatureIterator(resource.iterator(),rod.getName())); return new SeekableRODIterator(new FeatureToGATKFeatureIterator(resource.iterator(),rod.getName()));
} }
} catch (IOException e) { } catch (IOException e) {
throw new StingException("Unable to create iterator for rod named " + rod.getName()); throw new StingException("Unable to create iterator for rod named " + rod.getName(),e);
} }
} }
@ -223,7 +223,7 @@ class ReferenceOrderedQueryDataPool extends ResourcePool<FeatureReader, Location
try { try {
resource.close(); resource.close();
} catch (IOException e) { } catch (IOException e) {
throw new StingException("Unable to close reader for rod named " + rod.getName()); throw new StingException("Unable to close reader for rod named " + rod.getName(),e);
} }
} }
} }