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Updating bundle script to handle new naming convention of CEU trio best practices callset

This commit is contained in:
Eric Banks 2012-10-30 09:11:56 -04:00
parent c95e893920
commit 8a402024c2
1 changed files with 2 additions and 2 deletions
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4
public/scala/qscript/org/broadinstitute/sting/queue/qscripts/GATKResourcesBundle.scala
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@ -141,8 +141,8 @@ class GATKResourcesBundle extends QScript {
// CEU trio (NA12878,NA12891,NA12892) best practices results (including PBT)
//
addResource(new Resource("/humgen/gsa-hpprojects/NA12878Collection/callsets/CEUtrio_BestPractices/current/CEUTrio.HiSeq.WGS.b37.UG.snps_and_indels.recalibrated.filtered.phaseByTransmission.vcf",
"CEUTrio.HiSeq.WGS.b37.UG.bestPractices.phaseByTransmission",b37,true,false))
addResource(new Resource("/humgen/gsa-hpprojects/NA12878Collection/callsets/CEUtrio_BestPractices/CEUTrio.HiSeq.WGS.b37.snps_and_indels.recalibrated.filtered.phased.CURRENT.vcf",
"CEUTrio.HiSeq.WGS.b37.bestPractices.phased",b37,true,false))
//
// example call set for wiki tutorial