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Apparently, no one else has tried to create a stateless walker over loci until 

now, as this should have come up: make sure reduce sums get transferred to the
next reduce.



git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@232 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
ebanks 2009-03-31 02:31:51 +00:00
parent ba99e9f648
commit 89c1762aa9
1 changed files with 2 additions and 2 deletions
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4
java/src/org/broadinstitute/sting/gatk/traversals/TraverseByLoci.java
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@ -120,7 +120,7 @@ public class TraverseByLoci extends TraversalEngine {
// Iterate forward to get all reference ordered data covering this locus
final List<ReferenceOrderedDatum> rodData = getReferenceOrderedDataAtLocus(rodIters, locus.getLocation());
walkAtLocus( walker, sum, locus, refSite, rodData );
sum = walkAtLocus( walker, sum, locus, refSite, rodData );
//System.out.format("Working at %s\n", locus.getLocation().toString());
@ -158,4 +158,4 @@ public class TraverseByLoci extends TraversalEngine {
printProgress("loci", locus.getLocation());
return sum;
}
}
}