diff --git a/public/java/src/org/broadinstitute/sting/utils/sam/ReadUtils.java b/public/java/src/org/broadinstitute/sting/utils/sam/ReadUtils.java index 5fa410922..14ebbaa6f 100755 --- a/public/java/src/org/broadinstitute/sting/utils/sam/ReadUtils.java +++ b/public/java/src/org/broadinstitute/sting/utils/sam/ReadUtils.java @@ -825,7 +825,7 @@ public class ReadUtils { * @return the read coordinate corresponding to the requested reference coordinate. (see warning!) */ @Requires({"refCoord >= read.getUnclippedStart()", "refCoord <= read.getUnclippedEnd()"}) - @Ensures({"result >= 0", "result < read.getReadLength()"}) + @Ensures({"result.getFirst() >= 0", "result.getFirst() < read.getReadLength()"}) public static Pair getReadCoordinateForReferenceCoordinate(SAMRecord read, int refCoord) { int readBases = 0; int refBases = 0;