Fixed typo in the name of the shell directory.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3644 348d0f76-0448-11de-a6fe-93d51630548a
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@ -11,7 +11,7 @@ for (bam <- inputs("bam")) {
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def commandLine = gatkCommandLine("VariantEval") + "-B eval,VCF,%s -o %s".format(vcfFile, evalFile)
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}
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// Make sure the Sting/scripts folder is in your path to use mergeText.sh and splitIntervals.sh.
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// Make sure the Sting/shell folder is in your path to use mergeText.sh and splitIntervals.sh.
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ug.scatterCount = 3
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ug.bamFiles :+= bam
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ug.vcfFile = swapExt(bam, "bam", "unfiltered.vcf")
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