diff --git a/java/src/org/broadinstitute/sting/gatk/datasources/providers/LocusReferenceView.java b/java/src/org/broadinstitute/sting/gatk/datasources/providers/LocusReferenceView.java index ad9ed191b..b6e0002bf 100755 --- a/java/src/org/broadinstitute/sting/gatk/datasources/providers/LocusReferenceView.java +++ b/java/src/org/broadinstitute/sting/gatk/datasources/providers/LocusReferenceView.java @@ -149,9 +149,9 @@ public class LocusReferenceView extends ReferenceView { * @param genomeLoc location to verify. */ private void validateLocation( GenomeLoc genomeLoc ) throws InvalidPositionException { - if( !genomeLoc.isSingleBP() ) - throw new InvalidPositionException( - String.format("Requested position larger than one base; start = %d, stop = %d", genomeLoc.getStart(), genomeLoc.getStop())); +// if( !genomeLoc.isSingleBP() ) +// throw new InvalidPositionException( +// String.format("Requested position larger than one base; start = %d, stop = %d", genomeLoc.getStart(), genomeLoc.getStop())); if( bounds != null && !bounds.containsP(genomeLoc) ) throw new InvalidPositionException( String.format("Requested position %s not within interval %s", genomeLoc, bounds));