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better formating 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2737 348d0f76-0448-11de-a6fe-93d51630548a
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depristo 2010-01-29 15:38:21 +00:00
parent 1993472b38
commit 88495a39d4
1 changed files with 5 additions and 9 deletions
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14
java/src/org/broadinstitute/sting/oneoffprojects/variantcontext/VariantContext.java
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@ -8,24 +8,20 @@ import java.util.*;
/** /**
* @author ebanks * @author depristo
* <p/> * <p/>
* Class VariantContext * Class VariantContext
* <p/> * <p/>
* This class represents a context that unifies one or more variants *
*
*/ */
public class VariantContext extends AttributedObject { public class VariantContext extends AttributedObject {
private GenomeLoc loc; private GenomeLoc loc;
private Set<Allele> alleles = new HashSet<Allele>();
private Map<String, Genotype> genotypes = new HashMap<String, Genotype>();
Type type = Type.UNDETERMINED; Type type = Type.UNDETERMINED;
private Set<Allele> alleles = new HashSet<Allele>();
private Map<String, Genotype> genotypes = new HashMap<String, Genotype>();
Set<Object> filters = new HashSet<Object>(); Set<Object> filters = new HashSet<Object>();
// --------------------------------------------------------------------------------------------------------- // ---------------------------------------------------------------------------------------------------------
// //
// constructors // constructors