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Trivial bug fix so that we don't bring the start up TraversalEngine banner twice when we only process a single locus 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5129 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
depristo 2011-01-30 21:22:16 +00:00
parent 57353294cc
commit 8640ca6278
1 changed files with 1 additions and 1 deletions
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2
java/src/org/broadinstitute/sting/gatk/traversals/TraversalEngine.java
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@ -246,7 +246,7 @@ public abstract class TraversalEngine<M,T,WalkerType extends Walker<M,T>,Provide
private void printProgress(GenomeLoc loc, ReadMetrics metrics, boolean mustPrint) {
final long nRecords = metrics.getNumIterations();
if ( nRecords == 1 ) {
if ( nRecords == 1 && mustPrint == false ) {
logger.info("[INITIALIZATION COMPLETE; TRAVERSAL STARTING]");
logger.info(String.format("%15s processed.%s runtime per.1M.%s completed total.runtime remaining",
"Location", getTraversalType(), getTraversalType()));