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Stop running away from my commits, test modules. 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5919 348d0f76-0448-11de-a6fe-93d51630548a
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chartl 2011-06-02 13:05:53 +00:00
parent 092952db44
commit 84c2c5d7e6
1 changed files with 1 additions and 1 deletions
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2
java/test/org/broadinstitute/sting/utils/MWUnitTest.java
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@ -61,7 +61,7 @@ public class MWUnitTest extends BaseTest {
Assert.assertEquals(MannWhitneyU.calculatePRecursively(sizes.first,sizes.second,10L,false,pm).second,0.021756021756021756,1e-14);
Assert.assertEquals(MannWhitneyU.calculatePNormalApproximation(sizes.first,sizes.second,10L,false).second,0.06214143703127617,1e-14);
logger.warn("Testing two-sided");
Assert.assertEquals((double)mwu2.runTwoSidedTest().second,4*0.021756021756021756,1e-8);
Assert.assertEquals((double)mwu2.runTwoSidedTest().second,2*0.021756021756021756,1e-8);
// tests using the hypothesis that set 1 dominates set 2 (U value = 30) -- empirical should be identical, normall approx close, uniform way off
Assert.assertEquals(MannWhitneyU.calculatePNormalApproximation(sizes.second,sizes.first,30L,true).second,2.0*0.08216463976903321,1e-14);