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Rename hg19 files in bundle to b37 since that's what they are

This commit is contained in:
Eric Banks 2012-11-14 11:47:09 -05:00
parent e35fd1c717
commit 843384e435
1 changed files with 2 additions and 2 deletions
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4
public/scala/qscript/org/broadinstitute/sting/queue/qscripts/GATKResourcesBundle.scala
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@ -147,13 +147,13 @@ class GATKResourcesBundle extends QScript {
//
// example call set for wiki tutorial
//
addResource(new Resource("/humgen/gsa-hpprojects/NA12878Collection/exampleCalls/NA12878.HiSeq.WGS.bwa.cleaned.raw.hg19.subset.vcf",
addResource(new Resource("/humgen/gsa-hpprojects/NA12878Collection/exampleCalls/NA12878.HiSeq.WGS.bwa.cleaned.raw.b37.subset.vcf",
"NA12878.HiSeq.WGS.bwa.cleaned.raw.subset", b37, true, true))
//
// Test BAM file, specific to each reference
//
addResource(new Resource("/humgen/gsa-hpprojects/NA12878Collection/bams/NA12878.HiSeq.WGS.bwa.cleaned.recal.hg19.20.bam",
addResource(new Resource("/humgen/gsa-hpprojects/NA12878Collection/bams/NA12878.HiSeq.WGS.bwa.cleaned.recal.b37.20.bam",
"IGNORE", b37, false, false))
//