changed the full name of maximum_reads to maximum_iterations for consistancy
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1475 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
parent
8e129d76fd
commit
8331c195fb
|
|
@ -1,5 +1,6 @@
|
|||
package org.broadinstitute.sting.gatk;
|
||||
|
||||
import net.sf.samtools.SAMFileReader;
|
||||
import org.broadinstitute.sting.utils.StingException;
|
||||
import org.broadinstitute.sting.utils.cmdLine.Argument;
|
||||
import org.simpleframework.xml.*;
|
||||
|
|
@ -14,8 +15,6 @@ import java.util.HashMap;
|
|||
import java.util.List;
|
||||
import java.util.Map;
|
||||
|
||||
import net.sf.samtools.SAMFileReader;
|
||||
|
||||
/**
|
||||
*
|
||||
* User: aaron
|
||||
|
|
@ -99,7 +98,7 @@ public class GATKArgumentCollection {
|
|||
public String outErrFileName = null;
|
||||
|
||||
@Element(required = false)
|
||||
@Argument(fullName = "maximum_reads", shortName = "M", doc = "Maximum number of iterations to process before exiting, the lower bound is zero. Intended only for testing", required = false)
|
||||
@Argument(fullName = "maximum_iterations", shortName = "M", doc = "Maximum number of iterations to process before exiting, the lower bound is zero. Intended only for testing", required = false)
|
||||
public Integer maximumEngineIterations = -1;
|
||||
|
||||
@Element(required = false)
|
||||
|
|
|
|||
Loading…
Reference in New Issue