diff --git a/public/java/src/org/broadinstitute/sting/gatk/datasources/reads/LowMemoryIntervalSharder.java b/public/java/src/org/broadinstitute/sting/gatk/datasources/reads/LowMemoryIntervalSharder.java index 198f7d7d3..ba6321121 100644 --- a/public/java/src/org/broadinstitute/sting/gatk/datasources/reads/LowMemoryIntervalSharder.java +++ b/public/java/src/org/broadinstitute/sting/gatk/datasources/reads/LowMemoryIntervalSharder.java @@ -59,8 +59,8 @@ public class LowMemoryIntervalSharder implements Iterator { */ public FilePointer next() { FilePointer current = wrappedIterator.next(); - //while(wrappedIterator.hasNext() && current.minus(wrappedIterator.peek()) == 0) - // current = current.combine(parser,wrappedIterator.next()); + while(wrappedIterator.hasNext() && current.minus(wrappedIterator.peek()) == 0) + current = current.combine(parser,wrappedIterator.next()); return current; }