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One more output tweak. 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1996 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
kiran 2009-11-09 04:42:55 +00:00
parent 00a7113d7a
commit 7fde6c0bf4
1 changed files with 2 additions and 2 deletions
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4
java/src/org/broadinstitute/sting/playground/gatk/walkers/contamination/FindContaminatingReadGroupsWalker.java
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@ -155,7 +155,7 @@ public class FindContaminatingReadGroupsWalker extends LocusWalker<Integer, Inte
*/
public void onTraversalDone(Integer result) {
//out.println("readgroup\tpvalue\tstatus\tbalances");
out.printf("%-10s\t%-10s\t%-10s\t%-10s%n", "readgroup", "pvalue", "status", "balances");
out.printf("%-10s\t%-13s\t%-10s\t%-10s%n", "readgroup", "pvalue", "status", "balances");
for (String rg : altTable.getRowNames()) {
String balances = "";
@ -198,7 +198,7 @@ public class FindContaminatingReadGroupsWalker extends LocusWalker<Integer, Inte
double pValue = Probability.studentT(dof, t);
//out.printf("%s\t%e\t%s\t[%s]\n", rg, pValue, (pValue < LIMIT ? "aberrant" : "nominal"), balances);
out.printf("%-10s\t%-10s\t%-10s\t[%-10s]\n",
out.printf("%-10s\t%-13s\t%-10s\t[%-10s]\n",
rg,
String.format("%e", pValue),
(pValue < LIMIT ? "aberrant" : "nominal"),