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Merge pull request #376 from broadinstitute/gg_AR_gatkdocfix 

Made AR an Advanced argument...
This commit is contained in:
Eric Banks 2013-08-14 12:48:05 -07:00
parent 928a9779db 19a4bf9ff0
commit 7f48f991cc
1 changed files with 1 additions and 0 deletions
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public/java/src/org/broadinstitute/sting/gatk/walkers/ActiveRegionWalker.java
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@ -83,6 +83,7 @@ public abstract class ActiveRegionWalker<MapType, ReduceType> extends Walker<Map
@Output(fullName="activeRegionOut", shortName="ARO", doc="Output the active region to this IGV formatted file", required = false, defaultToStdout = false)
public PrintStream activeRegionOutStream = null;
@Advanced
@Input(fullName="activeRegionIn", shortName="AR", doc="Use this interval list file as the active regions to process", required = false)
protected List<IntervalBinding<Feature>> activeRegionBindings = null;