From 7db4497013f400ab2150c9e18851fb71c53ac0cf Mon Sep 17 00:00:00 2001
From: aaron <aaron@348d0f76-0448-11de-a6fe-93d51630548a>
Date: Tue, 16 Jun 2009 19:44:38 +0000
Subject: [PATCH] fixing the readTraversal output

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1019 348d0f76-0448-11de-a6fe-93d51630548a
---
 .../org/broadinstitute/sting/gatk/traversals/TraverseReads.java | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/java/src/org/broadinstitute/sting/gatk/traversals/TraverseReads.java b/java/src/org/broadinstitute/sting/gatk/traversals/TraverseReads.java
index c3642d360..1dab93433 100755
--- a/java/src/org/broadinstitute/sting/gatk/traversals/TraverseReads.java
+++ b/java/src/org/broadinstitute/sting/gatk/traversals/TraverseReads.java
@@ -137,7 +137,7 @@ public class TraverseReads extends TraversalEngine {
                 sum = readWalker.reduce(x, sum);
             }
 
-            if (locus != null) { printProgress("loci", locus.getLocation()); }
+            printProgress("reads", null);
         }
         return sum;
     }