Updated md5sum for MendelianViolationEvaluator test to reflect the change in column alignment in VariantEval.
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@ -298,7 +298,7 @@ public class VariantEvalIntegrationTest extends WalkerTest {
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WalkerTestSpec spec = new WalkerTestSpec("-T VariantEval -R "+b37KGReference+" --eval " + variantEvalTestDataRoot + vcfFile + " -ped "+ variantEvalTestDataRoot + pedFile +" -noEV -EV MendelianViolationEvaluator -L 1:10109-10315 -o %s -mvq 0 -noST",
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WalkerTestSpec spec = new WalkerTestSpec("-T VariantEval -R "+b37KGReference+" --eval " + variantEvalTestDataRoot + vcfFile + " -ped "+ variantEvalTestDataRoot + pedFile +" -noEV -EV MendelianViolationEvaluator -L 1:10109-10315 -o %s -mvq 0 -noST",
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1,
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1,
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Arrays.asList("85a8fc01a1f50839667bfcd04155f735"));
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Arrays.asList("66e72c887124f40933d32254b2dd44a3"));
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executeTestParallel("testVEMendelianViolationEvaluator" + vcfFile, spec);
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executeTestParallel("testVEMendelianViolationEvaluator" + vcfFile, spec);
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}
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}
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