From 7cecec7d006593776c9a75905a41e68616e0304c Mon Sep 17 00:00:00 2001
From: rpoplin <rpoplin@348d0f76-0448-11de-a6fe-93d51630548a>
Date: Thu, 6 May 2010 18:55:07 +0000
Subject: [PATCH] Removing zero no-calls restriction in AC stats

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3314 348d0f76-0448-11de-a6fe-93d51630548a
---
 .../sting/gatk/walkers/varianteval/SimpleMetricsByAC.java      | 3 +--
 1 file changed, 1 insertion(+), 2 deletions(-)

diff --git a/java/src/org/broadinstitute/sting/gatk/walkers/varianteval/SimpleMetricsByAC.java b/java/src/org/broadinstitute/sting/gatk/walkers/varianteval/SimpleMetricsByAC.java
index 490268c1d..15acb7399 100755
--- a/java/src/org/broadinstitute/sting/gatk/walkers/varianteval/SimpleMetricsByAC.java
+++ b/java/src/org/broadinstitute/sting/gatk/walkers/varianteval/SimpleMetricsByAC.java
@@ -143,8 +143,7 @@ public class SimpleMetricsByAC extends VariantEvaluator {
 
         if (eval != null &&
                 eval.isSNP() &&
-                eval.hasGenotypes() &&
-                eval.getNoCallCount() == 0 ) {
+                eval.hasGenotypes()) {
             if ( metrics == null )
                 metrics = new MetricsByAc(2 * eval.getNSamples());
             metrics.incrValue(eval);