diff --git a/public/java/src/org/broadinstitute/sting/utils/clipreads/ClippingRepresentation.java b/public/java/src/org/broadinstitute/sting/utils/clipreads/ClippingRepresentation.java index 0dbe55726..d574ba2f0 100644 --- a/public/java/src/org/broadinstitute/sting/utils/clipreads/ClippingRepresentation.java +++ b/public/java/src/org/broadinstitute/sting/utils/clipreads/ClippingRepresentation.java @@ -21,6 +21,8 @@ public enum ClippingRepresentation { SOFTCLIP_BASES, /** + * WARNING: THIS OPTION IS STILL UNDER DEVELOPMENT AND IS NOT SUPPORTED. + * * Change the read's cigar string to hard clip (H, see sam-spec) away the bases. * Hard clipping, unlike soft clipping, actually removes bases from the read, * reducing the resulting file's size but introducing an irrevesible (i.e.,