zzh
/
gatk-3.8
1
0
Fork 0
Code Issues Pull Requests Packages Projects Releases Wiki Activity

renaming MergingIterator to RODMergingIterator as it is more appropriate for this specialized implementation 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4461 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
asivache 2010-10-08 14:08:28 +00:00
parent bffb8bb01f
commit 77dddd0afa
1 changed files with 5 additions and 5 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

10
java/src/org/broadinstitute/sting/utils/collections/MergingIterator.java → java/src/org/broadinstitute/sting/utils/collections/RODMergingIterator.java
View File

@ -32,7 +32,7 @@ import org.broadinstitute.sting.utils.GenomeLoc;
import java.util.*; import java.util.*;
public class MergingIterator implements Iterator<RODRecordList>, Iterable<RODRecordList> { public class RODMergingIterator implements Iterator<RODRecordList>, Iterable<RODRecordList> {
PriorityQueue<Element> queue = new PriorityQueue<Element>(); PriorityQueue<Element> queue = new PriorityQueue<Element>();
private class Element implements Comparable<Element> { private class Element implements Comparable<Element> {
@ -45,7 +45,7 @@ public class MergingIterator implements Iterator<RODRecordList>, Iterable<RODRec
if ( ! it.hasNext() ) throw new ReviewedStingException("Iterator is empty"); if ( ! it.hasNext() ) throw new ReviewedStingException("Iterator is empty");
update(); update();
} else { } else {
throw new ReviewedStingException("Iterator passed to MergingIterator is not LocationAwareSeekableRODIterator"); throw new ReviewedStingException("Iterator passed to RODMergingIterator is not LocationAwareSeekableRODIterator");
} }
} }
@ -76,15 +76,15 @@ public class MergingIterator implements Iterator<RODRecordList>, Iterable<RODRec
return this; return this;
} }
public MergingIterator() { public RODMergingIterator() {
; ;
} }
public MergingIterator(Iterator<RODRecordList> it) { public RODMergingIterator(Iterator<RODRecordList> it) {
add(it); add(it);
} }
public MergingIterator(Collection<Iterator<RODRecordList>> its) { public RODMergingIterator(Collection<Iterator<RODRecordList>> its) {
for ( Iterator<RODRecordList> it : its ) { for ( Iterator<RODRecordList> it : its ) {
add(it); add(it);
} }