diff --git a/python/Geli2GFF.py b/python/Geli2GFF.py index 928434be0..e9911e740 100755 --- a/python/Geli2GFF.py +++ b/python/Geli2GFF.py @@ -29,8 +29,9 @@ if __name__ == "__main__": for line in pipe: if line[0] not in ('@', '#'): fields = line.split("\t") + #print fields try: - contig = Index2AffyChr[int(fields[0])] + contig = fields[0] #Index2AffyChr[int(fields[0])] except KeyError, ValueError: print "skipping "+fields[0] continue # Skip entries not in chr 0 through 24