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Add check for mixed genotype so that we don't exception out for a valid record

This commit is contained in:
Eric Banks 2011-12-14 11:26:43 -05:00
parent 9497e9492c
commit 7648521718
1 changed files with 2 additions and 0 deletions
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2
public/java/src/org/broadinstitute/sting/gatk/walkers/varianteval/evaluators/CountVariants.java
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@ -182,6 +182,8 @@ public class CountVariants extends VariantEvaluator implements StandardEval {
nHomDerived++; nHomDerived++;
} }
break;
case MIXED:
break; break;
default: default:
throw new ReviewedStingException("BUG: Unexpected genotype type: " + g); throw new ReviewedStingException("BUG: Unexpected genotype type: " + g);