diff --git a/public/java/src/org/broadinstitute/sting/gatk/walkers/varianteval/evaluators/CountVariants.java b/public/java/src/org/broadinstitute/sting/gatk/walkers/varianteval/evaluators/CountVariants.java index c740eb78c..e5e8dfaf5 100755 --- a/public/java/src/org/broadinstitute/sting/gatk/walkers/varianteval/evaluators/CountVariants.java +++ b/public/java/src/org/broadinstitute/sting/gatk/walkers/varianteval/evaluators/CountVariants.java @@ -182,6 +182,8 @@ public class CountVariants extends VariantEvaluator implements StandardEval { nHomDerived++; } + break; + case MIXED: break; default: throw new ReviewedStingException("BUG: Unexpected genotype type: " + g);