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Replacing Mills file with new gold standard indel set in the resource bundle for release with v1.5

This commit is contained in:
Ryan Poplin 2012-01-17 15:02:45 -05:00
parent 80a1ae254b
commit 75f87db468
1 changed files with 2 additions and 2 deletions
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4
public/scala/qscript/org/broadinstitute/sting/queue/qscripts/GATKResourcesBundle.scala
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@ -134,8 +134,8 @@ class GATKResourcesBundle extends QScript {
addResource(new Resource("/humgen/1kg/processing/official_release/phase1/ALL.wgs.VQSR_consensus_biallelic.20101123.indels.sites.vcf",
"1000G_biallelic.indels", b37, true, false))
addResource(new Resource("/humgen/gsa-hpprojects/GATK/data/Comparisons/Validated/Mills_Devine_Indels_2011/ALL.wgs.indels_mills_devine_hg19_leftAligned_collapsed_double_hit.sites.vcf",
"Mills_Devine_2hit.indels", b37, true, true))
addResource(new Resource("/humgen/gsa-hpprojects/GATK/data/Comparisons/Unvalidated/GoldStandardIndel/gold.standard.indel.MillsAnd1000G.b37.vcf",
"Mills_and_1000G_gold_standard.indels", b37, true, true))
//
// example call set for wiki tutorial