From 747521c849d59005d2a07f353912ac813726d964 Mon Sep 17 00:00:00 2001 From: kiran Date: Wed, 20 May 2009 16:00:30 +0000 Subject: [PATCH] Fixed the simplest of typos. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@761 348d0f76-0448-11de-a6fe-93d51630548a --- .../sting/secondarybase/AnnotateSecondaryBase.java | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/java/src/org/broadinstitute/sting/secondarybase/AnnotateSecondaryBase.java b/java/src/org/broadinstitute/sting/secondarybase/AnnotateSecondaryBase.java index d2a8a216d..d24b2b80c 100755 --- a/java/src/org/broadinstitute/sting/secondarybase/AnnotateSecondaryBase.java +++ b/java/src/org/broadinstitute/sting/secondarybase/AnnotateSecondaryBase.java @@ -40,7 +40,7 @@ public class AnnotateSecondaryBase extends CommandLineProgram { @Argument(fullName="cycle_ranges", shortName="CR", doc="Cycle ranges for single-end or paired reads (i.e. '0-50,56-106') (0-based inclusive)") public String CYCLE_RANGES; @Argument(fullName="tlim", shortName="T", doc="Number of reads to use for parameter initialization", required=false) public int TRAINING_LIMIT = 100000; @Argument(fullName="clim", shortName="C", doc="Number of reads to basecall", required=false) public int CALLING_LIMIT = Integer.MAX_VALUE; - @Argument(fullName="runbarcode", shortName="B", doc="Run barcode (embedded as part of the read name") public String RUN_BARCODE; + @Argument(fullName="runbarcode", shortName="B", doc="Run barcode (embedded as part of the read name)") public String RUN_BARCODE; public static void main(String[] argv) { Instance = new AnnotateSecondaryBase();