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Fix BQSR docs

This commit is contained in:
Eric Banks 2012-08-24 13:20:10 -04:00
parent 1999b95754
commit 740520c23b
1 changed files with 1 additions and 1 deletions
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public/java/src/org/broadinstitute/sting/gatk/walkers/bqsr/BaseRecalibrator.java
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@ -56,7 +56,7 @@ import java.lang.reflect.Constructor;
import java.util.ArrayList; import java.util.ArrayList;
/** /**
* First pass of the base quality score recalibration -- Generates recalibration table based on various user-specified covariates (such as reported quality score, cycle, and dinucleotide). * First pass of the base quality score recalibration -- Generates recalibration table based on various user-specified covariates (such as read group, reported quality score, machine cycle, and nucleotide context).
* *
* <p> * <p>
* This walker is designed to work as the first pass in a two-pass processing step. It does a by-locus traversal operating * This walker is designed to work as the first pass in a two-pass processing step. It does a by-locus traversal operating