diff --git a/java/src/org/broadinstitute/sting/gatk/GenomeAnalysisEngine.java b/java/src/org/broadinstitute/sting/gatk/GenomeAnalysisEngine.java index a8b48bd63..0747f87cb 100755 --- a/java/src/org/broadinstitute/sting/gatk/GenomeAnalysisEngine.java +++ b/java/src/org/broadinstitute/sting/gatk/GenomeAnalysisEngine.java @@ -702,7 +702,7 @@ public class GenomeAnalysisEngine { else throw new StingException("The GATK cannot currently process unindexed BAM files"); - return new (shardType); + return new MonolithicShardStrategy(shardType); } ShardStrategy shardStrategy = null;