diff --git a/public/java/src/org/broadinstitute/sting/gatk/traversals/TraversalEngine.java b/public/java/src/org/broadinstitute/sting/gatk/traversals/TraversalEngine.java index 4422d49ae..8c617e4dc 100755 --- a/public/java/src/org/broadinstitute/sting/gatk/traversals/TraversalEngine.java +++ b/public/java/src/org/broadinstitute/sting/gatk/traversals/TraversalEngine.java @@ -242,7 +242,7 @@ public abstract class TraversalEngine,Provide else progressPrintFrequency = 10 * 1000; // in milliseconds - final String posName = loc == null ? (mustPrint ? "done" : "unmapped reads") : Integer.toString(loc.getStart()); + final String posName = loc == null ? (mustPrint ? "done" : "unmapped reads") : String.format("%s:%d", loc.getContig(), loc.getStart()); logger.info(String.format("%15s %5.2e %s %s %5.1f%% %s %s", posName, nRecords*1.0, elapsed, unitRate, 100*fractionGenomeTargetCompleted, estTotalRuntime, timeToCompletion));