diff --git a/java/test/org/broadinstitute/sting/gatk/GenomeAnalysisTKTest.java b/java/test/org/broadinstitute/sting/gatk/GenomeAnalysisTKTest.java index 2708d9f4a..aceafcaec 100755 --- a/java/test/org/broadinstitute/sting/gatk/GenomeAnalysisTKTest.java +++ b/java/test/org/broadinstitute/sting/gatk/GenomeAnalysisTKTest.java @@ -44,7 +44,7 @@ public class GenomeAnalysisTKTest extends BaseTest { private final File refFileName = new File("/humgen/gsa-scr1/GATK_Data/Validation_Data/Homo_sapiens_assembly17.fasta"); // skip n number of chromesomes when we do a chromesome by chromesome jumping - private final int skipChrome = 8; + private final int skipChrome = 15; /** * This has been blindly moved out of the GenomeAnalysisTK.java where it was hanging on, * but the author makes very limited promises of any functionality