No debugging output (even conditional) for ReadTransformers in PrintReads
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@ -228,7 +228,6 @@ public class PrintReads extends ReadWalker<GATKSAMRecord, SAMFileWriter> impleme
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GATKSAMRecord workingRead = readIn;
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GATKSAMRecord workingRead = readIn;
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for ( final ReadTransformer transformer : readTransformers ) {
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for ( final ReadTransformer transformer : readTransformers ) {
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if ( logger.isDebugEnabled() ) logger.debug("Applying transformer " + transformer + " to read " + readIn.getReadName());
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workingRead = transformer.apply(workingRead);
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workingRead = transformer.apply(workingRead);
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}
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}
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