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Merge branch 'master' of ssh://gsa2.broadinstitute.org/humgen/gsa-scr1/gsa-engineering/git/stable

This commit is contained in:
Ryan Poplin 2012-08-02 11:41:20 -04:00
parent cb8bc18aeb 0381fd7c83
commit 6f7a236cfc
2 changed files with 3 additions and 3 deletions
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4
public/scala/test/org/broadinstitute/sting/queue/pipeline/DataProcessingPipelineTest.scala
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@ -41,7 +41,7 @@ class DataProcessingPipelineTest {
" -D " + BaseTest.publicTestDir + "exampleDBSNP.vcf", " -D " + BaseTest.publicTestDir + "exampleDBSNP.vcf",
" -test ", " -test ",
" -p " + projectName).mkString " -p " + projectName).mkString
spec.fileMD5s += testOut -> "021db3a52ee40d9193895213aaa05dd5" spec.fileMD5s += testOut -> "60d39ae909fdd049920b54e0965b6d3c"
PipelineTest.executeTest(spec) PipelineTest.executeTest(spec)
} }
@ -60,7 +60,7 @@ class DataProcessingPipelineTest {
" -bwa /home/unix/carneiro/bin/bwa", " -bwa /home/unix/carneiro/bin/bwa",
" -bwape ", " -bwape ",
" -p " + projectName).mkString " -p " + projectName).mkString
spec.fileMD5s += testOut -> "94e32ee974aa15d05ee7d3e99f2f8c8f" spec.fileMD5s += testOut -> "61ca3237afdfabf78ee27a5bb80dae59"
PipelineTest.executeTest(spec) PipelineTest.executeTest(spec)
} }

2
public/scala/test/org/broadinstitute/sting/queue/pipeline/PacbioProcessingPipelineTest.scala
View File

@ -40,7 +40,7 @@ class PacbioProcessingPipelineTest {
" -blasr ", " -blasr ",
" -test ", " -test ",
" -D " + BaseTest.publicTestDir + "exampleDBSNP.vcf").mkString " -D " + BaseTest.publicTestDir + "exampleDBSNP.vcf").mkString
spec.fileMD5s += testOut -> "8b5f9e8e1ba5bd686e3084eaeea23889" spec.fileMD5s += testOut -> "61b06e8b78a93e6644657e6d38851084"
PipelineTest.executeTest(spec) PipelineTest.executeTest(spec)
} }
} }