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Updated gsalib gsa.read.gatkreport to return all reports, even those beginning with '.'. 

In PreQC using geom_blank() so MEDIAN_INSERT_SIZE plot doesn't crash on facet_grid(scales='free') when data doesn't contain points for 'RF' or 'TANDEM'.
This commit is contained in:
Khalid Shakir 2011-10-05 18:30:40 -04:00
parent 982983355f
commit 6d6149b9a2
1 changed files with 1 additions and 1 deletions
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public/R/src/gsalib/R/gsa.read.gatkreport.R
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@ -99,5 +99,5 @@ gsa.read.gatkreport <- function(filename) {
.gsa.assignGATKTableToEnvironment(tableName, tableHeader, tableRows, tableEnv);
}
gatkreport = as.list(tableEnv);
gatkreport = as.list(tableEnv, all.names=TRUE);
}