diff --git a/testdata/ValidatingPileupTargets.list b/testdata/ValidatingPileupTargets.list index 08772b636..68f524ca1 100755 --- a/testdata/ValidatingPileupTargets.list +++ b/testdata/ValidatingPileupTargets.list @@ -1,7 +1,7 @@ # e.coli /humgen/gsa-scr1/GATK_Data/Validation_Data/MV1994.bam /humgen/gsa-scr1/GATK_Data/Validation_Data/Escherichia_coli_K12_MG1655.fasta * -# daughter chrom 6 deep coverage +# daughter chrom 6 deep coverage first 10 MB /broad/1KG/DCC/data/NA12878/alignment/NA12878.chrom6.SRP000032.2009_02.bam /broad/1KG/reference/human_b36_both.fasta 6:1-10,000,00 # daughter chrom 1 deep coverage @@ -16,9 +16,9 @@ # anthony PCR lane /seq/dirseq/aphilipp/combo/sequences/pcr/samfiles/10035.5.clean.sam /seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta * -# anthony PCR lane +# anthony HS lane /seq/dirseq/aphilipp/combo/sequences/hs/samfiles/30CLA.5.clean.sam /seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta * -# WGS tumor +# WGS tumor -- figure it out #/broad/1KG/pilot3/sams/NA12892.bam /seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta *