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git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@440 348d0f76-0448-11de-a6fe-93d51630548a
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depristo 2009-04-15 22:06:36 +00:00
parent 2eabcfedb7
commit 6c9d110eb9
1 changed files with 3 additions and 3 deletions
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6
testdata/ValidatingPileupTargets.list vendored
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@ -1,7 +1,7 @@
# e.coli
/humgen/gsa-scr1/GATK_Data/Validation_Data/MV1994.bam /humgen/gsa-scr1/GATK_Data/Validation_Data/Escherichia_coli_K12_MG1655.fasta *
# daughter chrom 6 deep coverage
# daughter chrom 6 deep coverage first 10 MB
/broad/1KG/DCC/data/NA12878/alignment/NA12878.chrom6.SRP000032.2009_02.bam /broad/1KG/reference/human_b36_both.fasta 6:1-10,000,00
# daughter chrom 1 deep coverage
@ -16,9 +16,9 @@
# anthony PCR lane
/seq/dirseq/aphilipp/combo/sequences/pcr/samfiles/10035.5.clean.sam /seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta *
# anthony PCR lane
# anthony HS lane
/seq/dirseq/aphilipp/combo/sequences/hs/samfiles/30CLA.5.clean.sam /seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta *
# WGS tumor
# WGS tumor -- figure it out
#/broad/1KG/pilot3/sams/NA12892.bam /seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta *