From 6b5560e1e91aa7b4c933b30d1373b255c3c3c278 Mon Sep 17 00:00:00 2001 From: ebanks Date: Tue, 23 Jun 2009 01:54:38 +0000 Subject: [PATCH] Fairly detailed first pass at a README for the MSA realigner git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1075 348d0f76-0448-11de-a6fe-93d51630548a --- doc/MSA_Realigner_README.txt | Bin 0 -> 13098 bytes 1 file changed, 0 insertions(+), 0 deletions(-) create mode 100755 doc/MSA_Realigner_README.txt diff --git a/doc/MSA_Realigner_README.txt b/doc/MSA_Realigner_README.txt new file mode 100755 index 0000000000000000000000000000000000000000..a93a40ccc28ac67c1c2dea00ab455a6e97bf3c86 GIT binary patch literal 13098 zcmeI3YfoI)8HLYhB>#s|z8EB9$4>GkbuZX)DiqtKKx9>@s<;{Bz(5%Yc7J@^_3Sl^ zz0aA!*s0t&QH9J5=j{FN_qyK8IsW&**1Dg%{q9V^5A}K3ecdf|o82pYA9c^Vi|(j9 z*PT;+a%Drm|Dmh<-MHH=S5|cAushJ-$K~p|RxN7hMz_)}>HE5_ZeOk8q>oNsGqrNo^#T5(o* z*ej=AO149t@k-aX%bk(Vfuoj7XzUd^!`1mzC#Pl4L=>Ze6LEk{@Qi%u%M#oxGQwNE zhIUws^hesUB(5)Y1^Qf%oMYXGKhDP*$K73hA9XLvI$Ohg&?WqjyW3iu_2>nSp~ZYh zV(a}}->fwx-ItcIFxuO`;uTJi42`|jXXScXJljg9GcNZIw5HYcf#|}|Jnh~o^tfwZ zIMk}s!Y>rZQ#tU4v96wrlI4Osq(Dz-2fe=3x7~8x{90ewV)pF#D8Ay8kyYFcM64#?s@mUvZMjW&XAma@gDC%zxKvh(V9Gx zRk#-}*u5&=k(86s11n$ZpM3?+O%uCs7tXQOQSk(PGWhv$EjA?I=ea-&w@KFh0pIx0<0bCXr{_I(hj1ZwU+)w_JxkI z1DSVqhgIm{OrPi(f5S#+%}$~W6yQ3ZZhbt^w;`GgwP74;wbn-ILeczAp%-}%3ny3z zpMnqWz^y%PD3vh_-m#Z`+FTi9k)L~5^nUmGm7Z6Ng-o;c16v)wk&?4bw~d%!HQX6@ z&~Y$fUwc^{N;TqR`-!+AhT=n6*~UGRplkGH>e!v{kp`<^IiE%hg+8%v-A%gRmGy~E z%S%imAG*Yga(;{5_J=)jnppDckzyM(xfCaO1O9?X?C9D>;UUy27kxw{R!;SUUO+qB zCcDTW)(uDkmqGn_1ioOL-MylLw!k8Ec3847dB?VoR_|&bac@1vW8mH^TC3hJ(ePRv z?C8EZjQozMciC>fghc#7;m(LND<9`9Oe4*4R`WP}h-dh2J&GtvCdRHrbDN7;+se9E zGzu@(!zu;hmpsJhKMOTzkx9XZ;k(hS zcmGt@a;?>HB*9mH)JaBGbmq)vd~^owdsSp;Iet($Uf0>cBu{+cOScA_w|5@)~ zKPx%E&ovfU(Vbf7877rx!mOk%D+CH&-X{PXMGweun{$uKoB# z!yrp*q3d*?+?A*V!|)GRLPimy+g{@e@OAM4kUUjFq70jpcU_gYn3@>E`|(SV(jMsu zTqzaBYB@XTIzOwm$cNmZewCV7NxrI4?#u+;7LO7`!G+@vZCCmESf&;$_7!XS}P9wzfm3t-L@&&f~Lc0v@4yR_Wtzc&?%xMS3W|g8dYKtaqb~Q2)bJgz-#1WY?Raa;QOVIYB?%vf|aP~|w{}+8$ z-w7w=>Sg_NO;N1~5~35=1+D*MRqA_p4wi~45c}D`e$f4GoxERg__e-+nIoOUchHK6 z0pss=e=cX+i&jJvY2Ow-O_V9V6UFRVR)!vR4~qs*b=tY^Q6V08e<-xq%UvXRsXNp} zoUlE;yQ#Z)JZN`Rz7274xqEs=fozQ5z{5%RxMZwddEs4Ae4~FpaYO4jMC)nyL|qIg zENgXm?9*Q>9Gma^4V_!k8!Ce{>EymPENo+ zo__pZ`T1`}3zlwM8eZ3mZLNE%PvQj`X60dJvLR84FW1$sJl*@Wu|==w2&N}y4_ZsU zX3|1zCx-b@rrpDbj3S#SR*2Eop>9zxIaUeJWQ@oRrw6{vgAE&E#G5 z>WY)AOpanZ*VkWmUv*zqBJCe83FA`t2 zY2_}x1}Dew=4F<*($btk)H~50-HeGvpuLgp6b9}(DG^NK|kzBTqlyPRYx$^+mW8g67)ZKEV7`7RC&=&AOEr4`P6&i z@_LQgk6KisZXA_p|5#b#<~(3)K9-bN&D@dEmNoMPopy9}Ecx#AzV|Z^-Nv5sz#Zw# z9l;$T!FS4Mb(ZvS`W^dnPCt9RPo{X#?D^0Vs2n!*ovtkyYD}iGI+yjp*5M2* zp6&VxUjeo8SJywS?tHD*IreVQs+}waAzO5H{rg-iccgFpG?T4)Sj&{gnPNdX89#ba ze0HpFK@?Z0oQ3ySd|A{LaHD^JSZf+3sC~?tD;KbqY(lJDk5XiT#Pv-v#DuXQL)fYx zCuon@ofln0`z20isi39Nw93MM!RqU(Z)<=|Ry!V^1;7n6t^W1LCHL(VS)2pWIujo> z@o86s&q`F*7+9UL0EqCvstLbnBK^Z_!ryYNr{?vP#(4E@@#MBECQ`N(FL-!+y`8wY zcgHiG59ywbU9PHzQB`Y##Pw|L>z(f4=VRrNs$+E?zI`qqxUU)xjJvLCAd|q?P|k^@ z0#n>Wn;$A@<_FGk;C3eJe0S|$E2X5my9Aa$Mt1+!9j@ptV#Qtx;@y|0mrO5Ifoxu`xXeOr(SJ6S{h?q;5L z>eLThG*&Si1HmdCEDmSqg??LM4!s8r&`+@%4#^ zlRn(tlzrj2aLyT3LL%WnG|{m03_a~F`HtgpR#R(QmrApC&CyY-({^R8nr>QIQFl~& zdi&U_w9wDRsoadr?VR(!nbg+Uo0WW_`$2Zk6y;W#f_yqtlvX>`(R5RIA{Byj=1rPp zRKXy+#%THz8K|DP3ndb0x0soIEaeFQ{!C^V{(-OlmqysBL>`!-7Yde4`F+2F2w zYH~d}cBf!)f8qoxu;Wr|`Iaa1?vCqzeAE*Z*TVRB>fm%3t_;9==1S}h2eqq5;!w)$ z--zcZfu?gOS(iS@RE=Kkl&Fn6a>t_NLyxugW@n!MScB=^`c(UrmP*Y*rPW$(MUj1U zHH+iCttO8f!I7=z>UQ_g=9vvKRpqJSMXA%E8fmThsyDRl`l?!aMHM+Ud21!AA#!h} zM6M&(fUD?u)_)07|!pg3~dAEY|Jy}lNex?=Xs7|u|X4Yrg2__z@^7aJM)FO}HSc7Y1w*A4mdGxr> zx!@i3Wlm?85k8R-{e<2hZ|t;g?jt^amxVXIkW{~o9*g*RB5Tz*NARtozq_C33Fn#Q zwpY0tCR=iM*jFcu;|+99Kc`psyf9HoFKK`B`FJC5y3C7|ws)_wVxPum;Wj6#m2W`;-!Iekx5wBVmha;h=pFifetp0FC`b!_|bd&AZ=9qBDhap1S80 zbLV-`qWEy1%4`@f%6o0L8(l5ApE`^=Lbc4$10A7xr!go5_4e(ApcajSf)8V1+qPPYm;3(J>J!|$TDx@@o|ufu8o*>H}<&bnpsiaN^@L37jIkBHE@}y zmwqD}p9J05Gu)YI@l1oc2UP)7>5qNYYx+3@i=jJbZ@9}l!HzF7xZe*O;_A}e2>+sF zLM8yK1%EQPfuA<3QbpLG;%%S?_JId#QD!lCNuKySJMm7(nc|lmifq9-D&_uLU{KmG z6_Tqp<6Y3o{?g{HJio10TGxKpwy8+w>%MQbe$?>X$ejkU%sdjQsl$mEBDL0%si2}8 zG~_otD@svUkQEN6T6%vUSx~+9OL@h8y}RhAQoly8SkPNR{BINEhkd{uZk^)UDt@Q( xN%3Ja*+@AY