From 05bf6e3726ad661289cda8e80e1889dd82422407 Mon Sep 17 00:00:00 2001
From: Eric Banks <ebanks@broadinstitute.org>
Date: Wed, 1 Aug 2012 10:27:00 -0400
Subject: [PATCH] Updating md5s in pipeline tests so that they finally pass

---
 .../sting/queue/pipeline/DataProcessingPipelineTest.scala     | 4 ++--
 .../sting/queue/pipeline/PacbioProcessingPipelineTest.scala   | 2 +-
 2 files changed, 3 insertions(+), 3 deletions(-)

diff --git a/public/scala/test/org/broadinstitute/sting/queue/pipeline/DataProcessingPipelineTest.scala b/public/scala/test/org/broadinstitute/sting/queue/pipeline/DataProcessingPipelineTest.scala
index 724f35cf6..778e6c28a 100644
--- a/public/scala/test/org/broadinstitute/sting/queue/pipeline/DataProcessingPipelineTest.scala
+++ b/public/scala/test/org/broadinstitute/sting/queue/pipeline/DataProcessingPipelineTest.scala
@@ -41,7 +41,7 @@ class DataProcessingPipelineTest {
       " -D " + BaseTest.publicTestDir + "exampleDBSNP.vcf",
       " -test ",
       " -p " + projectName).mkString
-    spec.fileMD5s += testOut -> "0f0b32e94640a8d548b4c1134ad4c075"
+    spec.fileMD5s += testOut -> "021db3a52ee40d9193895213aaa05dd5"
     PipelineTest.executeTest(spec)
   }
 
@@ -60,7 +60,7 @@ class DataProcessingPipelineTest {
       " -bwa /home/unix/carneiro/bin/bwa",
       " -bwape ",
       " -p " + projectName).mkString
-    spec.fileMD5s += testOut -> "6b4f13d22b45d7d617ee959fdc278ed2"
+    spec.fileMD5s += testOut -> "94e32ee974aa15d05ee7d3e99f2f8c8f"
     PipelineTest.executeTest(spec)
   }
 
diff --git a/public/scala/test/org/broadinstitute/sting/queue/pipeline/PacbioProcessingPipelineTest.scala b/public/scala/test/org/broadinstitute/sting/queue/pipeline/PacbioProcessingPipelineTest.scala
index 6e4c5ed3e..62ee7ce90 100644
--- a/public/scala/test/org/broadinstitute/sting/queue/pipeline/PacbioProcessingPipelineTest.scala
+++ b/public/scala/test/org/broadinstitute/sting/queue/pipeline/PacbioProcessingPipelineTest.scala
@@ -40,7 +40,7 @@ class PacbioProcessingPipelineTest {
       " -blasr ",
       " -test ",
       " -D " + BaseTest.publicTestDir + "exampleDBSNP.vcf").mkString
-    spec.fileMD5s += testOut -> "2f2026882a2850bb14a858524158d5a8"
+    spec.fileMD5s += testOut -> "8b5f9e8e1ba5bd686e3084eaeea23889"
     PipelineTest.executeTest(spec)
   }
 }