From 68309408e48e4615224bcb20ad2b1bac48b5f28b Mon Sep 17 00:00:00 2001
From: sjia <sjia@348d0f76-0448-11de-a6fe-93d51630548a>
Date: Tue, 4 Aug 2009 21:23:01 +0000
Subject: [PATCH] git-svn-id:
 file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1378
 348d0f76-0448-11de-a6fe-93d51630548a

---
 .../sting/playground/gatk/walkers/HLAcaller/CallHLAWalker.java  | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/java/src/org/broadinstitute/sting/playground/gatk/walkers/HLAcaller/CallHLAWalker.java b/java/src/org/broadinstitute/sting/playground/gatk/walkers/HLAcaller/CallHLAWalker.java
index 0f5243d95..68d4282d2 100644
--- a/java/src/org/broadinstitute/sting/playground/gatk/walkers/HLAcaller/CallHLAWalker.java
+++ b/java/src/org/broadinstitute/sting/playground/gatk/walkers/HLAcaller/CallHLAWalker.java
@@ -231,6 +231,8 @@ public class CallHLAWalker extends LocusWalker<Integer, Pair<Long, Long>>{
             Scores.put("GT", mLikelihoods[8]);
             Scores.put("TT", mLikelihoods[9]);
 
+            
+
             //Update probabilities for combinations of alleles
             //For each HLA allele
             String r1 = "", r2 = "", s1 = "", s2 = "";