Various updates for KB, mostly so that reviews through IGV work properly.

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1. Fix for the -okayToMiss argument for indels.
In cases where we make calls with different alleles, it wasn't allowing us to skip the site for FNs.

2. Need to add confidence and isComplexEvent attributes to the equality and duplicate checks in MVC.

3. Treat unknown confidences as reviewed for now.
We need this until IGV gets updated to use confidences for reviews.

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Eric Banks 2013-07-19 01:08:40 -04:00

parent 224fec7379

commit 672fbe437e

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