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Bug fix in custom override of queryOverlapping. 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2743 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
hanna 2010-01-29 21:35:59 +00:00
parent c6cc844e55
commit 668c7da33d
1 changed files with 4 additions and 1 deletions
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5
java/src/net/sf/samtools/BAMFileReader2.java
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@ -565,7 +565,10 @@ class BAMFileReader2
* Closes down the existing iterator. * Closes down the existing iterator.
*/ */
public void close() { public void close() {
wrappedIterator.close(); if (this != mCurrentIterator) {
throw new IllegalStateException("Attempt to close non-current iterator");
}
mCurrentIterator = null;
} }
/** /**