From 65c5d55b724bffd1d895e9cadd7d4acfa1d276dd Mon Sep 17 00:00:00 2001
From: Eric Banks <ebanks@broadinstitute.org>
Date: Tue, 2 Aug 2011 12:48:36 -0400
Subject: [PATCH] Not sure how I missed these.  These lines are now
 superfluous.

---
 .../sting/gatk/walkers/genotyper/UGCallVariants.java             | 1 -
 1 file changed, 1 deletion(-)

diff --git a/public/java/src/org/broadinstitute/sting/gatk/walkers/genotyper/UGCallVariants.java b/public/java/src/org/broadinstitute/sting/gatk/walkers/genotyper/UGCallVariants.java
index 68d8f9b54..a3b9f379e 100755
--- a/public/java/src/org/broadinstitute/sting/gatk/walkers/genotyper/UGCallVariants.java
+++ b/public/java/src/org/broadinstitute/sting/gatk/walkers/genotyper/UGCallVariants.java
@@ -62,7 +62,6 @@ public class UGCallVariants extends RodWalker<VariantCallContext, Integer> {
     private Set<String> trackNames = new HashSet<String>();
 
     public void initialize() {
-        UAC.NO_SLOD = true;
 
         for ( ReferenceOrderedDataSource d : getToolkit().getRodDataSources() ) {
             if ( d.getName().startsWith("variant") )