From 648a36d08ea218fd699f6ed9ca6594ba83b6f272 Mon Sep 17 00:00:00 2001
From: hanna <hanna@348d0f76-0448-11de-a6fe-93d51630548a>
Date: Sat, 23 Jan 2010 01:46:18 +0000
Subject: [PATCH] Temporary solution: add the commons logging implementation to
 the VariantFiltration package.  Downstream solution is described in GSA-262.

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2665 348d0f76-0448-11de-a6fe-93d51630548a
---
 packages/VariantFiltration.xml | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/packages/VariantFiltration.xml b/packages/VariantFiltration.xml
index e137cf00c..48fa0ff37 100644
--- a/packages/VariantFiltration.xml
+++ b/packages/VariantFiltration.xml
@@ -4,6 +4,8 @@
     <main-class name="org.broadinstitute.sting.gatk.CommandLineGATK" />
     <resource-bundle file="StingText.properties" />
     <dependencies>
+      <!-- Workaround - depend on the logger impl required by JEXL -->
+      <package name="org.apache.commons.logging.impl" />
       <!-- Variant filtration -->
       <class name="org.broadinstitute.sting.gatk.walkers.filters.VariantFiltrationWalker" />
     </dependencies>