From 63f5262e456465068537992743934506f6b9d7d3 Mon Sep 17 00:00:00 2001 From: Mark DePristo Date: Sun, 8 Jul 2012 11:41:47 -0400 Subject: [PATCH] mergeInfoWithMaxAC is no longer hidden in CombineVariants --- .../sting/gatk/walkers/variantutils/CombineVariants.java | 1 - 1 file changed, 1 deletion(-) diff --git a/public/java/src/org/broadinstitute/sting/gatk/walkers/variantutils/CombineVariants.java b/public/java/src/org/broadinstitute/sting/gatk/walkers/variantutils/CombineVariants.java index 629c7f84c..94fa29173 100755 --- a/public/java/src/org/broadinstitute/sting/gatk/walkers/variantutils/CombineVariants.java +++ b/public/java/src/org/broadinstitute/sting/gatk/walkers/variantutils/CombineVariants.java @@ -166,7 +166,6 @@ public class CombineVariants extends RodWalker { @Argument(fullName="suppressCommandLineHeader", shortName="suppressCommandLineHeader", doc="If true, do not output the header containing the command line used", required=false) public boolean SUPPRESS_COMMAND_LINE_HEADER = false; - @Hidden @Argument(fullName="mergeInfoWithMaxAC", shortName="mergeInfoWithMaxAC", doc="If true, when VCF records overlap the info field is taken from the one with the max AC instead of only taking the fields which are identical across the overlapping records.", required=false) public boolean MERGE_INFO_WITH_MAX_AC = false;