Slightly better error message
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@ -155,7 +155,7 @@ public class GenotypeLikelihoods {
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likelihoodsAsVector[i] = Integer.parseInt(strings[i]) / -10.0;
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}
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} catch (NumberFormatException e) {
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throw new UserException.MalformedVCF("The GL/PL tag contains non-integer values");
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throw new UserException.MalformedVCF("The GL/PL tag contains non-integer values: " + likelihoodsAsString_PLs);
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}
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return likelihoodsAsVector;
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} else
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