From 639a01f38209636aa974b12651fe3ccc737e2aef Mon Sep 17 00:00:00 2001
From: Eric Banks <ebanks@broadinstitute.org>
Date: Fri, 12 Aug 2011 07:15:08 -0400
Subject: [PATCH] Updating integration test now that VE has been updated

---
 .../walkers/variantutils/VCFStreamingIntegrationTest.java     | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/public/java/test/org/broadinstitute/sting/gatk/walkers/variantutils/VCFStreamingIntegrationTest.java b/public/java/test/org/broadinstitute/sting/gatk/walkers/variantutils/VCFStreamingIntegrationTest.java
index ec3d1f580..132a11273 100644
--- a/public/java/test/org/broadinstitute/sting/gatk/walkers/variantutils/VCFStreamingIntegrationTest.java
+++ b/public/java/test/org/broadinstitute/sting/gatk/walkers/variantutils/VCFStreamingIntegrationTest.java
@@ -93,8 +93,8 @@ public class VCFStreamingIntegrationTest extends WalkerTest {
         selectTestSpec = new WalkerTestSpec(
             "-T VariantEval" +
             " -R " + b36KGReference +
-            " -B:eval,vcf3 " + testFile +
-            " -B:comp,vcf,storage=STREAM " + tmpFifo.getAbsolutePath() +
+            " --eval,vcf3 " + testFile +
+            " --comp,vcf,storage=STREAM " + tmpFifo.getAbsolutePath() +
             " -EV CompOverlap -noEV -noST" +
             " -o %s",
             1,