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CountReads does not permit the use of output files

This commit is contained in:
Joel Thibault 2012-10-11 13:59:21 -04:00
parent a5333006bb
commit 637e0cf151
1 changed files with 0 additions and 1 deletions
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public/java/src/org/broadinstitute/sting/gatk/walkers/qc/CountReads.java
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@ -33,7 +33,6 @@ import org.broadinstitute.sting.utils.sam.GATKSAMRecord;
* java -Xmx2g -jar GenomeAnalysisTK.jar \ * java -Xmx2g -jar GenomeAnalysisTK.jar \
* -R ref.fasta \ * -R ref.fasta \
* -T CountReads \ * -T CountReads \
* -o output.txt \
* -I input.bam \ * -I input.bam \
* [-L input.intervals] * [-L input.intervals]
* </pre> * </pre>